Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs28622424 chr17:62984210 A/G AMZ2P1 chr17:62962668-62971694:- 0.9 5.57 9.2E-7 Box Plot
ACC rs28628748 chr4:77199913 G/A NAAA chr4:76834810-76862204:- 0.53 5.39 1.71E-6 Box Plot
ACC rs28633322 chr8:124439743 C/T WDYHV1 chr8:124428965-124479470:+ 0.52 5.37 1.83E-6 Box Plot
ACC rs28633835 chr16:50372678 G/A CYLD chr16:50775961-50835846:+ 0.6 5.47 1.28E-6 Box Plot
ACC rs28637026 chr5:112871015 G/A APC chr5:112043195-112181936:+ 0.88 5.11 4.61E-6 Box Plot
ACC rs28637991 chr19:16120148 T/A C19orf44 chr19:16607122-16632163:+ 0.73 5.13 4.29E-6 Box Plot
ACC rs2864145 chr20:37066140 A/G LOC388796 chr20:37049239-37064018:- 0.78 5.37 1.84E-6 Box Plot
ACC rs28670022 chr7:76057242 T/C UPK3B chr7:76139745-76145838:+ 0.72 5.99 1.98E-7 Box Plot
ACC rs2868349 chr20:44423798 G/A WFDC3 chr20:44376583-44420571:- 0.95 7.16 2.71E-9 Box Plot
ACC rs2868366 chr7:76050132 A/G UPK3B chr7:76139745-76145838:+ 0.7 5.57 9.16E-7 Box Plot
ACC rs2868367 chr7:76016648 A/T UPK3B chr7:76139745-76145838:+ 0.68 5.19 3.57E-6 Box Plot
ACC rs28688313 chr7:76305103 C/T POMZP3 chr7:76239303-76256578:- 0.97 5.93 2.47E-7 Box Plot
ACC rs2869067 chr17:62991653 A/G AMZ2P1 chr17:62962668-62971694:- 0.91 5.69 5.92E-7 Box Plot
ACC rs2869072 chr17:62991867 A/G AMZ2P1 chr17:62962668-62971694:- 0.91 5.69 5.92E-7 Box Plot
ACC rs28706268 chr7:72281758 G/A TYW1B chr7:72023729-72298777:- 1.15 7.13 3.09E-9 Box Plot